Index

A

add() (impy.viewer.viewer.napariViewers method) add_axes() (in module impy.utils.axesop) add_dask() (in module impy.viewer.utils) add_image() (impy.viewer.viewer.napariViewers method) add_label() (impy.arrays.Label method) (impy.arrays.label.Label method) add_labeledarray() (in module impy.viewer.utils) add_labels() (impy.viewer.viewer.napariViewers method) (in module impy.viewer.utils) add_paths() (in module impy.viewer.utils) add_points() (impy.viewer.viewer.napariViewers method) (in module impy.viewer.utils) add_rois() (in module impy.viewer.utils) add_shapes() (impy.viewer.viewer.napariViewers method) add_surface() (impy.viewer.viewer.napariViewers method) add_table() (impy.viewer.viewer.napariViewers method) add_tracks() (impy.viewer.viewer.napariViewers method) (in module impy.viewer.utils) add_vectors() (impy.viewer.viewer.napariViewers method) additional_props (impy.arrays.bases.metaarray.MetaArray attribute) (impy.arrays.lazy.LazyImgArray attribute) (impy.arrays.LazyImgArray attribute) (impy.arrays.PhaseArray attribute) (impy.arrays.phasearray.PhaseArray attribute) (impy.arrays.PropArray attribute) (impy.arrays.specials.PropArray attribute) affine() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) agg() (impy.collections.DataList method) append_label() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) apply() (impy.collections.DataDict method) (impy.collections.DataList method) apply_dask_func() (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) arange() (in module impy.core) (in module impy.lazy.core) area_closing() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) area_opening() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) argmax_nd() (impy.arrays.bases.metaarray.MetaArray method) array() (in module impy.core) (in module impy.lazy.core) ArrayCovariates (class in impy.arrays.labeledarray) as_exp() (impy.arrays.PhaseArray method) (impy.arrays.phasearray.PhaseArray method)

as_float() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) as_frame() (impy.arrays.PropArray method) (impy.arrays.specials.PropArray method) as_img_type() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) as_larger_type() (impy.arrays.Label method) (impy.arrays.label.Label method) as_path() (impy.frame.frames.TrackFrame method) as_rgba() (impy.arrays.bases.metaarray.MetaArray method) as_standard_type() (impy.frame.frames.AxesFrame method) as_uint16() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) as_uint8() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) asarray() (in module impy.core) (in module impy.lazy.core) asbigarray() (in module impy.core) asdict() (impy.utils.gauss.DiagonalGaussian method) aslabel() (in module impy.core) aslazy() (in module impy.core) axes (impy.arrays.axesmixin.AxesMixin property) (impy.arrays.ImgArray attribute) (impy.arrays.imgarray.ImgArray attribute) (impy.arrays.LabeledArray property) (impy.arrays.labeledarray.LabeledArray property) (impy.arrays.labeledarray.SupportAxesSlicing property) (impy.roi.Roi property) (impy.roi.RoiList property) (impy.viewer.viewer.napariViewers property) AxesFrame (class in impy.frame.frames) AxesMixin (class in impy.arrays.axesmixin) axis_targeted_slicing() (in module impy.utils.slicer) axisof() (impy.arrays.axesmixin.AxesMixin method) (impy.viewer.viewer.napariViewers method)

B

best_dtype() (in module impy.arrays.label) big_imread() (in module impy.core) BigImgArray (class in impy.arrays) (class in impy.arrays.big) bind (class in impy.binder) binning() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) (impy.arrays.PhaseArray method) (impy.arrays.phasearray.PhaseArray method)

border (impy.arrays.PhaseArray attribute) (impy.arrays.phasearray.PhaseArray attribute) bound (impy.binder.bind attribute) boundary (impy.arrays.tiled.TiledImage property) broadcast_arrays() (in module impy.core) broadcast_to() (impy.arrays.bases.metaarray.MetaArray method)

C

center_of_mass() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) centroid_sm() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) check_filter_func() (in module impy.arrays.imgarray) check_input_and_output() (in module impy.utils.deco) check_input_and_output_lazy() (in module impy.utils.deco) check_nd() (in module impy.utils.misc) chunk_info (impy.arrays.lazy.LazyImgArray property) (impy.arrays.LazyImgArray property) chunks (impy.arrays.tiled.TiledImage property) chunksize (impy.arrays.lazy.LazyImgArray property) (impy.arrays.LazyImgArray property) chunksizeof() (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) chunksizesof() (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) circular_mask() (in module impy.core) clip() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) closing() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) coef_filter() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) col_axes (impy.frame.frames.AxesFrame property) complement_axes() (in module impy.utils.axesop) ComplexArrayView (class in impy.viewer.utils) compute() (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method)

construct_by_copying() (impy.arrays.labeledarray.ArrayCovariates method) construct_by_slicing() (impy.arrays.labeledarray.ArrayCovariates method) convex_hull() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) convolve() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) copy() (impy.arrays.labeledarray.SupportAxesSlicing method) (impy.roi.Roi method) corner_harris() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) corner_peaks() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) count_neighbors() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) covariates (impy.arrays.LabeledArray property) (impy.arrays.labeledarray.LabeledArray property) crop_center() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) crop_kernel() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) cupy_dispatcher() (in module impy.array_api) current_slice (impy.viewer.viewer.napariViewers property) cursor_pos (impy.viewer.viewer.napariViewers property) cursor_to_pixel() (impy.viewer.viewer.napariViewers method) curve_fit() (impy.arrays.PropArray method) (impy.arrays.specials.PropArray method)

D

data_raw (impy.viewer.utils.ComplexArrayView property) DataDict (class in impy.collections) DataList (class in impy.collections) default_rng() (in module impy.lazy.random) (in module impy.random) deg2rad() (impy.arrays.PhaseArray method) (impy.arrays.phasearray.PhaseArray method) delete_label() (impy.arrays.Label method) (impy.arrays.label.Label method) depth (impy.arrays.tiled.TiledImage property) diagonal_gaussian() (in module impy.utils.gauss) DiagonalGaussian (class in impy.utils.gauss) diameter_closing() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) diameter_opening() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) dilation() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method)

dims_to_spatial_axes() (in module impy.utils.deco) distance_map() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) dog_filter() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.tiled.TiledImage method) doh_filter() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) drift_correction() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) drop() (impy.roi.Roi method) (impy.roi.RoiList method) dtype (impy.arrays.axesmixin.AxesMixin attribute) (impy.arrays.lazy.LazyImgArray property) (impy.arrays.LazyImgArray property) (impy.viewer.utils.ComplexArrayView property)

E

edge_filter() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) edge_grad() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) empty() (in module impy.core) (in module impy.lazy.core) emsd() (impy.frame.frames.TrackFrame method) enhance_contrast() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method)

entropy_filter() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) erosion() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) estimate_sigma() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) expand_labels() (impy.arrays.Label method) (impy.arrays.label.Label method) extract() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method)

F

fft() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) fill_hole() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) filter_stubs() (impy.frame.frames.TrackFrame method) find_corners() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) find_first_appeared() (in module impy.utils.axesop) find_sm() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) fit() (impy.utils.gauss.DiagonalGaussian method) flood() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method)

focus_map() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) for_each_channel() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) for_params() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) fourier_ncc() (in module impy.correlation) fourier_shell_correlation() (in module impy.correlation) fourier_zncc() (in module impy.correlation) from_imagejroi() (impy.roi.Roi class method) fromfile() (impy.roi.RoiList class method) front_image() (in module impy.viewer.utils) fsc() (in module impy.correlation) ft_pcc_landscape() (in module impy.correlation) ft_pcc_maximum() (in module impy.correlation) ft_pcc_maximum_with_corr() (in module impy.correlation) full() (in module impy.core) (in module impy.lazy.core)

G

gabor_angle() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) gabor_filter() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) gauss_correction() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) gauss_sm() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) gaussfit() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) Gaussian (class in impy.utils.gauss) gaussian_filter() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) (impy.arrays.tiled.TiledImage method)

gaussian_kernel() (in module impy.core) GaussianBackground (class in impy.utils.gauss) GaussianParticle (class in impy.utils.gauss) GB (impy.arrays.lazy.LazyImgArray property) gb (impy.arrays.lazy.LazyImgArray property) GB (impy.arrays.LazyImgArray property) gb (impy.arrays.LazyImgArray property) generate() (impy.utils.gauss.DiagonalGaussian method) get() (impy.viewer.viewer.napariViewers method) get_a_selected_layer() (in module impy.viewer.utils) get_axes_tuple() (in module impy.arrays.axesmixin) get_coordinates() (impy.roi.PolygonRoi static method) (impy.roi.Roi static method) get_coords() (impy.frame.frames.AxesFrame method) get_viewer_scale() (in module impy.viewer.utils) glcm_props() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) goto() (impy.viewer.viewer.napariViewers method)

H

hessian_angle() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) hessian_eig() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) hessian_eigval() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method)

highpass_filter() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) hist() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.arrays.PropArray method) (impy.arrays.specials.PropArray method)

I

ifft() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) ImageGenerator (class in impy.lazy.random) (class in impy.random) ImgArray (class in impy.arrays) (class in impy.arrays.imgarray) implements() (impy.arrays.bases.metaarray.MetaArray class method) ImportOnRequest (class in impy.utils.utilcls) impy module impy.array_api module impy.arrays module impy.arrays.axesmixin module impy.arrays.bases module impy.arrays.bases.metaarray module impy.arrays.bases.overload module impy.arrays.big module impy.arrays.imgarray module impy.arrays.label module impy.arrays.labeledarray module impy.arrays.lazy module impy.arrays.phasearray module impy.arrays.specials module impy.arrays.tiled module impy.axes module impy.binder module impy.collections module impy.core module impy.correlation module impy.frame module impy.frame.frames module impy.io module impy.lazy module impy.lazy.core module impy.lazy.random module

impy.random module impy.roi module impy.utils module impy.utils.axesop module impy.utils.deco module impy.utils.gauss module impy.utils.misc module impy.utils.slicer module impy.utils.utilcls module impy.viewer module impy.viewer.utils module impy.viewer.viewer module imread() (in module impy.core) (in module impy.io) (in module impy.lazy.core) imread_collection() (in module impy.core) imread_dask() (in module impy.io) imsave() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) (in module impy.io) imsd() (impy.frame.frames.TrackFrame method) imshow() (impy.arrays.Label method) (impy.arrays.label.Label method) (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.arrays.PhaseArray method) (impy.arrays.phasearray.PhaseArray method) increment() (impy.arrays.Label method) (impy.arrays.label.Label method) increment_iter() (impy.arrays.Label method) (impy.arrays.label.Label method) indices() (in module impy.core) (in module impy.lazy.core) inpaint() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) insert() (impy.collections.DataList method) (impy.roi.RoiList method) iradon() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) isel() (impy.arrays.bases.metaarray.MetaArray method) itemsize (impy.arrays.lazy.LazyImgArray property) (impy.arrays.LazyImgArray property) iter() (impy.arrays.axesmixin.AxesMixin method) (impy.frame.frames.AxesFrame method) iter_layer() (in module impy.viewer.utils) iter_selected_layer() (in module impy.viewer.utils) iter_slice() (in module impy.arrays.lazy)

K

kalman_filter() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method)

L

Label (class in impy.arrays) (class in impy.arrays.label) label() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) label_if() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) label_threshold() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) LabeledArray (class in impy.arrays) (class in impy.arrays.labeledarray) labels (impy.arrays.LabeledArray property) (impy.arrays.labeledarray.LabeledArray property) laplacian_filter() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) largest_zeros() (in module impy.utils.misc) last_added (impy.binder.bind attribute) layer_to_impy_object() (in module impy.viewer.utils) layers (impy.viewer.viewer.napariViewers property) lazy_imread() (in module impy.core) LazyImgArray (class in impy.arrays) (class in impy.arrays.lazy)

lbp() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) length() (impy.frame.frames.PathFrame method) LineRoi (class in impy.roi) link() (impy.frame.frames.MarkerFrame method) local_dft() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) local_power_spectra() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) log_filter() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.tiled.TiledImage method) lowpass_conv_filter() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) lowpass_filter() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.tiled.TiledImage method) lucy() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) (impy.arrays.tiled.TiledImage method) lucy_tv() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method)

M

make_world_scale() (in module impy.viewer.utils) manders_coloc() (in module impy.correlation) map_coordinates() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.arrays.PhaseArray method) (impy.arrays.phasearray.PhaseArray method) mark_reader() (in module impy.io) mark_writer() (in module impy.io) MarkerFrame (class in impy.frame.frames) masked_square() (in module impy.utils.gauss) max() (impy.arrays.bases.metaarray.MetaArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) mean() (impy.arrays.bases.metaarray.MetaArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) mean_filter() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) (impy.arrays.PhaseArray method) (impy.arrays.phasearray.PhaseArray method) median_filter() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) MetaArray (class in impy.arrays.bases.metaarray) metadata (impy.arrays.axesmixin.AxesMixin property) (impy.arrays.bases.metaarray.MetaArray property) (impy.arrays.ImgArray attribute) (impy.arrays.imgarray.ImgArray attribute) (impy.arrays.lazy.LazyImgArray property) (impy.arrays.LazyImgArray property) min() (impy.arrays.bases.metaarray.MetaArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) module impy impy.array_api impy.arrays impy.arrays.axesmixin impy.arrays.bases impy.arrays.bases.metaarray impy.arrays.bases.overload impy.arrays.big impy.arrays.imgarray impy.arrays.label impy.arrays.labeledarray impy.arrays.lazy impy.arrays.phasearray impy.arrays.specials impy.arrays.tiled impy.axes impy.binder impy.collections impy.core impy.correlation impy.frame impy.frame.frames impy.io impy.lazy impy.lazy.core impy.lazy.random impy.random impy.roi impy.utils impy.utils.axesop impy.utils.deco impy.utils.gauss impy.utils.misc impy.utils.slicer impy.utils.utilcls impy.viewer impy.viewer.utils impy.viewer.viewer

msd() (impy.frame.frames.TrackFrame method) mu (impy.utils.gauss.DiagonalGaussian property) mu_inrange() (impy.utils.gauss.Gaussian method)

N

n_spatial_dims (impy.roi.Roi property) name (impy.arrays.bases.metaarray.MetaArray property) (impy.arrays.lazy.LazyImgArray property) (impy.arrays.LazyImgArray property) napariViewers (class in impy.viewer.viewer) nbytes (impy.viewer.utils.ComplexArrayView property) ncc() (in module impy.correlation) ncc_filter() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) ndim (impy.arrays.axesmixin.AxesMixin attribute) (impy.arrays.lazy.LazyImgArray property) (impy.arrays.LazyImgArray property) (impy.roi.Roi property) (impy.utils.gauss.DiagonalGaussian property) (impy.viewer.utils.ComplexArrayView property)

nmi() (in module impy.correlation) normal() (impy.lazy.random.ImageGenerator method) (impy.random.ImageGenerator method) (in module impy.lazy.random) (in module impy.random) NotMe (class in impy.arrays.bases.metaarray) NP_DISPATCH (impy.arrays.bases.metaarray.MetaArray attribute) np_normalize_axis_tuple() (in module impy.arrays.bases.overload)

O

ones() (in module impy.core) (in module impy.lazy.core) opening() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.Label method) (impy.arrays.label.Label method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method)

optimize() (impy.arrays.Label method) (impy.arrays.label.Label method)

P

pad() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) pad_defocus() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) params (impy.utils.gauss.DiagonalGaussian property) parent (impy.arrays.labeledarray.ArrayCovariates property) PathFrame (class in impy.frame.frames) pathprops() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) pcc_landscape() (in module impy.correlation) pcc_maximum() (in module impy.correlation) pcc_maximum_with_corr() (in module impy.correlation) peak_local_max() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) pearson_coloc() (in module impy.correlation) periodicity (impy.arrays.PhaseArray property) (impy.arrays.phasearray.PhaseArray property) PhaseArray (class in impy.arrays) (class in impy.arrays.phasearray) plot() (impy.arrays.PropArray method) (impy.arrays.specials.PropArray method) (impy.roi.Roi method) (impy.roi.RoiList method) pointprops() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method)

PointRoi (class in impy.roi) poisson() (impy.lazy.random.ImageGenerator method) (impy.random.ImageGenerator method) polar_pcc_maximum() (in module impy.correlation) polar_pcc_maximum_with_corr() (in module impy.correlation) PolygonRoi (class in impy.roi) PolyLineRoi (class in impy.roi) power_spectra() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) proj() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.Label method) (impy.arrays.label.Label method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) (impy.frame.frames.AxesFrame method) proj_labels() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) PropArray (class in impy.arrays) (class in impy.arrays.specials) propname (impy.arrays.PropArray attribute) (impy.arrays.specials.PropArray attribute)

R

rad2deg() (impy.arrays.PhaseArray method) (impy.arrays.phasearray.PhaseArray method) radial_profile() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) radon() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) random() (impy.lazy.random.ImageGenerator method) (impy.random.ImageGenerator method) (in module impy.lazy.random) (in module impy.random) random_uint16() (impy.lazy.random.ImageGenerator method) (impy.random.ImageGenerator method) (in module impy.lazy.random) (in module impy.random) random_uint8() (impy.lazy.random.ImageGenerator method) (impy.random.ImageGenerator method) (in module impy.lazy.random) (in module impy.random) random_walker() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) range (impy.arrays.LabeledArray property) (impy.arrays.labeledarray.LabeledArray property) read_meta() (in module impy.core) rechunk() (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) RectangleRoi (class in impy.roi) regionprops() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.PhaseArray method) (impy.arrays.phasearray.PhaseArray method)

relabel() (impy.arrays.Label method) (impy.arrays.label.Label method) release() (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) remove_edges() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) remove_fine_objects() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) remove_large_objects() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) remove_skeleton_structure() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) rescale() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.utils.gauss.DiagonalGaussian method) rescale_intensity() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) reshape() (impy.arrays.bases.metaarray.MetaArray method) reslice() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.arrays.PhaseArray method) (impy.arrays.phasearray.PhaseArray method) rof_filter() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) Roi (class in impy.roi) RoiList (class in impy.roi) roiread() (in module impy.core) rois (impy.arrays.LabeledArray property) (impy.arrays.labeledarray.LabeledArray property) rolling_ball() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) rotate() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) rotated_crop() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method)

S

same_dtype() (in module impy.utils.deco) sample_image() (in module impy.core) sample_points() (impy.arrays.labeledarray.SegmentedLine method) scale (impy.arrays.axesmixin.AxesMixin property) (impy.arrays.ImgArray attribute) (impy.arrays.imgarray.ImgArray attribute) (impy.frame.frames.AxesFrame property) (impy.viewer.viewer.napariViewers property) scale_unit (impy.arrays.axesmixin.AxesMixin property) SegmentedLine (class in impy.arrays.labeledarray) sel() (impy.arrays.bases.metaarray.MetaArray method) selection (impy.viewer.viewer.napariViewers property) set_axes() (impy.arrays.axesmixin.AxesMixin method) set_axis_label() (impy.arrays.axesmixin.AxesMixin method) set_border() (impy.arrays.PhaseArray method) (impy.arrays.phasearray.PhaseArray method) set_scale() (impy.arrays.axesmixin.AxesMixin method) (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.frame.frames.AxesFrame method) setCupy() (impy.array_api.XP method) setNumpy() (impy.array_api.XP method) sg (impy.utils.gauss.DiagonalGaussian property) sg_inrange() (impy.utils.gauss.Gaussian method) shape (impy.arrays.axesmixin.AxesMixin attribute) (impy.arrays.bases.metaarray.MetaArray property) (impy.arrays.lazy.LazyImgArray property) (impy.arrays.LazyImgArray property) (impy.viewer.utils.ComplexArrayView property) shape_info (impy.arrays.axesmixin.AxesMixin property) shift() (impy.utils.gauss.DiagonalGaussian method) size (impy.arrays.lazy.LazyImgArray property) (impy.arrays.LazyImgArray property) sizeof() (impy.arrays.axesmixin.AxesMixin method) sizesof() (impy.arrays.axesmixin.AxesMixin method) skeletonize() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) slice_axes() (in module impy.utils.axesop) smooth_mask() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) solve_slicer() (in module impy.utils.slicer) sort() (impy.frame.frames.AxesFrame method) sort_axes() (impy.arrays.bases.metaarray.MetaArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method)

source (impy.arrays.bases.metaarray.MetaArray property) (impy.arrays.ImgArray attribute) (impy.arrays.imgarray.ImgArray attribute) (impy.arrays.lazy.LazyImgArray property) (impy.arrays.LazyImgArray property) spatial_shape (impy.arrays.axesmixin.AxesMixin property) specify() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) spline_filter() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) split() (impy.arrays.bases.metaarray.MetaArray method) (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) (impy.frame.frames.AxesFrame method) split_pixel_unit() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) square() (in module impy.utils.gauss) standard_exponential() (impy.lazy.random.ImageGenerator method) (impy.random.ImageGenerator method) standard_normal() (impy.lazy.random.ImageGenerator method) (impy.random.ImageGenerator method) start() (impy.viewer.viewer.napariViewers method) std() (impy.arrays.bases.metaarray.MetaArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) std_filter() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) stepof() (impy.viewer.viewer.napariViewers method) stokes() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) str_to_slice() (in module impy.utils.slicer) stretch() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) structure_tensor_eig() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) structure_tensor_eigval() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) sum() (impy.arrays.bases.metaarray.MetaArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) SupportAxesSlicing (class in impy.arrays.labeledarray) switch_slice() (in module impy.utils.axesop)

T

T (impy.arrays.bases.metaarray.MetaArray property) threshold() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) tile() (impy.arrays.LabeledArray method) (impy.arrays.labeledarray.LabeledArray method) tiled (impy.arrays.ImgArray attribute) (impy.arrays.imgarray.ImgArray attribute) (impy.arrays.lazy.LazyImgArray attribute) (impy.arrays.LazyImgArray attribute) tiled_lowpass_filter() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) tiled_lucy() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method)

TiledAccessor (class in impy.arrays.tiled) TiledImage (class in impy.arrays.tiled) to_labels() (in module impy.viewer.utils) tofile() (impy.roi.RoiList method) tophat() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) tp_no_verbose() (in module impy.frame.frames) track_drift() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method) (impy.frame.frames.TrackFrame method) track_template() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) TrackFrame (class in impy.frame.frames) transpose() (impy.arrays.bases.metaarray.MetaArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method)

U

unit (impy.arrays.PhaseArray attribute) (impy.arrays.phasearray.PhaseArray attribute)

unmix() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method)

V

value (impy.arrays.axesmixin.AxesMixin attribute) (impy.arrays.bases.metaarray.MetaArray property) (impy.arrays.LazyImgArray attribute)

viewer (impy.viewer.viewer.napariViewers property) viewer_imread() (in module impy.viewer.utils) voronoi() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method)

W

watershed() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) wave_num() (in module impy.arrays.imgarray) wavelet_denoising() (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) wiener() (impy.arrays.big.BigImgArray method) (impy.arrays.BigImgArray method) (impy.arrays.ImgArray method) (impy.arrays.imgarray.ImgArray method) (impy.arrays.lazy.LazyImgArray method) (impy.arrays.LazyImgArray method)

wrap_method() (in module impy.arrays.big)

X

XP (class in impy.array_api)

Z

zeros() (in module impy.core) (in module impy.lazy.core) zncc() (in module impy.correlation)

zncc_landscape() (in module impy.correlation) zncc_maximum() (in module impy.correlation) zncc_maximum_with_corr() (in module impy.correlation)